MyoOptix
MyoOptix
CARDIAC ORGANOID ANALYSIS

MyoOptix

Desktop software for quantitative analysis of cardiac organoid contractility — measuring heart rate, beat intervals, contraction and relaxation dynamics from brightfield video.

🎯

No calibration needed

Automatic ROI detection via U-Net or Otsu segmentation.

Quick Analysis

Single-video analysis with the full MyoOptix pipeline.

📊

Full metrics

HR, IBI, CS/CE/RE, contractility — same as the main app.

🖥️

Runs locally

Native Mac and Windows app — video never leaves your machine.

See It In Action

Step through a real analysis run on a cardiac organoid video with 3 spontaneously beating ROIs.

Video frame with detected ROIs
ROI 1 ROI 2 ROI 3
Video  1.mov
Resolution  960 × 540
Frame rate  30 fps
ROIs detected  3
Method  U-Net (ResNet-34)
ROI overlay
ROI 1 ROI 2 ROI 3
MyoOptix — Analysis Log
ROI 1
Heart Rate23 BPM
IBI avg1376 ms
Contractility64.9 µm/s
ROI 2
Heart Rate31 BPM
IBI avg994 ms
Contractility76.7 µm/s
ROI 3
Heart Rate18 BPM
IBI avg1757 ms
Contractility81.1 µm/s

Motion Signal & Beat Detection

Beat waveforms

Contractility Trace

Contractility traces

HOW IT WORKS

Getting started

1

Request access

Fill in the form below with your name, institution, and email.

2

Get approved

We review and approve your request, then send you a confirmation email.

3

Download & login

Download the app, log in with your email and password.

4

Analyze

Drop in a video and run the full analysis pipeline.

Request access

Fill in your details below. You'll receive a confirmation email, and we'll notify you once your account is ready.

Your information is used only to manage access to MyoOptix. We do not share your data with third parties. Contact b101110099@tmu.edu.tw for questions.

Download

Download MyoOptix for your platform. An approved account is required to log in.

macOS
v1.0.0
Download
macOS 12 Monterey or later
Windows
Coming soon
Coming soon
Windows 10 / 11 (64-bit)

TEAM

About

Grant Principal Investigator

李岡遠 教授
Lee, Kang-Yun

Division of Pulmonary Medicine
School of Medicine
Taipei Medical University

Lab Director

楊添鈞 助理教授
Yang, Tien-Chun

Department of Anatomy and Cell Biology
College of Medicine
Taipei Medical University

Developer

賴竑劭
Lai, Hung-Shao

Department of Anatomy and Cell Biology
College of Medicine
Taipei Medical University